USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: ACTY_HUMAN USC-OGP 2-DE database:  ACTY_HUMAN ACTY_HUMAN General information about the entry View entry in simple text format Entry name ACTY_HUMAN Primary accession number P42025 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Beta-centractin; AltName: Full=Actin-related protein 1B; Short=ARP1B;. Gene name Name=ACTR1B Synonyms=CTRN2 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0398: pI=5.91; Mw=44996 PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0699: pI=5.92; Mw=44642 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1178: pI=6.52; Mw=44777 Cross-references UniProtKB/Swiss-Prot P42025; ACTY_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name ACTY_HUMAN Primary accession number P42025 Secondary accession number(s) D3DVH2 Q53SK5 Q9BRB7 Sequence was last modified on  November 1, 1995 (version 1) Annotations were last modified on  March 15, 2017 (version 160) Name and origin of the protein Description RecName: Full=Beta-centractin; AltName: Full=Actin-related protein 1B; Short=ARP1B; Gene name Name=ACTR1B Synonyms=CTRN2 Encoded on Name=ACTR1B; Synonyms=CTRN2 Keywords Acetylation; ATP-binding; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Nitration; Nucleotide-binding; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X82207; CAA57691.1; -; mRNA EMBL AC017099; AAY24280.1; -; Genomic_DNA EMBL CH471127; EAX01924.1; -; Genomic_DNA EMBL CH471127; EAX01927.1; -; Genomic_DNA EMBL BC004374; AAH04374.1; -; mRNA EMBL BC006372; AAH06372.1; -; mRNA EMBL BC010090; AAH10090.1; -; mRNA CCDS CCDS2033.1; -; . RefSeq NP_005726.1; NM_005735.3; . UniGene Hs.98791; -; . ProteinModelPortal P42025; -; . SMR P42025; -; . BioGrid 115424; 57; . IntAct P42025; 17; . MINT MINT-1374548; -; . STRING 9606.ENSP00000289228; -; . iPTMnet P42025; -; . PhosphoSitePlus P42025; -; . BioMuta ACTR1B; -; . DMDM 1168333; -; . OGP P42025; -; . REPRODUCTION-2DPAGE IPI00029469; -; . EPD P42025; -; . MaxQB P42025; -; . PaxDb P42025; -; . PeptideAtlas P42025; -; . PRIDE P42025; -; . DNASU 10120; -; . Ensembl ENST00000289228; ENSP00000289228; ENSG00000115073; . GeneID 10120; -; . KEGG hsa:10120; -; . UCSC uc002syb.3; human; . CTD 10120; -; . DisGeNET 10120; -; . GeneCards ACTR1B; -; . HGNC HGNC:168; ACTR1B; . HPA HPA047443; -; . MalaCards ACTR1B; -; . MIM 605144; gene; . neXtProt NX_P42025; -; . OpenTargets ENSG00000115073; -; . PharmGKB PA24487; -; . eggNOG KOG0676; Eukaryota; . eggNOG COG5277; LUCA; . GeneTree ENSGT00840000129754; -; . HOGENOM HOG000233340; -; . HOVERGEN HBG003771; -; . InParanoid P42025; -; . KO K16575; -; . OMA DEWHENP; -; . OrthoDB EOG091G08LD; -; . PhylomeDB P42025; -; . TreeFam TF300420; -; . Reactome R-HSA-2132295; MHC class II antigen presentation; . Reactome R-HSA-6798695; Neutrophil degranulation; . SignaLink P42025; -; . ChiTaRS ACTR1B; human; . GeneWiki ACTR1B; -; . GenomeRNAi 10120; -; . PRO PR:P42025; -; . Proteomes UP000005640; Chromosome 2; . Bgee ENSG00000115073; -; . CleanEx HS_ACTR1B; -; . Genevisible P42025; HS; . GO GO:0005813; C:centrosome; IDA:UniProtKB; . GO GO:0005737; C:cytoplasm; IDA:LIFEdb; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0005869; C:dynactin complex; TAS:ProtInc; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005576; C:extracellular region; TAS:Reactome; . GO GO:1904813; C:ficolin-1-rich granule lumen; TAS:Reactome; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0015630; C:microtubule cytoskeleton; IDA:HPA; . GO GO:0034774; C:secretory granule lumen; TAS:Reactome; . GO GO:0005524; F:ATP binding; IEA:UniProtKB-KW; . GO GO:0019886; P:antigen processing and presentation of exogenous peptide antigen via MHC class II; TAS:Reactome; . GO GO:0043312; P:neutrophil degranulation; TAS:Reactome; . InterPro IPR004000; Actin; . InterPro IPR020902; Actin/actin-like_CS; . InterPro IPR004001; Actin_CS; . InterPro IPR029909; Arp1; . PANTHER PTHR11937; PTHR11937; 1; . PANTHER PTHR11937:SF273; PTHR11937:SF273; 1; . Pfam PF00022; Actin; 1; . PRINTS PR00190; ACTIN; . SMART SM00268; ACTIN; 1; . PROSITE PS00432; ACTINS_2; 1; . PROSITE PS01132; ACTINS_ACT_LIKE; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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